AI coding agent
BeanAlis
Open-source AI coding agent for the terminal. Multi-step tasks, repo edit/search, MCP tools, hybrid model routing, and verify gates—bring your own OpenAI-compatible API.
View on GitHubOpen source
Public code.
Inspectable systems.
Selected Japality projects are published on GitHub under open-source licences—AI agents, experimental LLM languages, scientific CLI tools, and research utilities. Most mobile apps in our portfolio are proprietary store products and are not listed here.
AI & developer systems
Agents, languages, and LLM workflows.
Work on how models write code, how languages serve LLMs, and how multi-step AI tasks can be controlled from the terminal, a desktop session, or a small runtime.
Agentic desktop
BeanAlis GUI
A policy-first Wayland desktop session on Hyprland or Sway: Aurora Glass bar, app search, agent dock, and local-first intents. Preview host session—not a daily driver yet.
View on GitHubLLM-first language
JapalityBean
Experimental LLM-first systems language and compiler (jbc). Explores languages that models can parse, generate, and repair—with type checking, IR, and native emit paths.
Workflow DSL
Japalitynil
Compact research prototype for an LLM-oriented workflow DSL. Goals, context, constraints, and steps are first-class constructs with a stable intermediate representation.
View on GitHubProduct invariant DSL
JNL-X
Runtime-free constraint language for store-native iOS and Android products. Shared algorithms and API contracts stay equivalent; platform character may diverge only inside a declared budget.
View on GitHubScientific computing
Rust tools for sequencing workflows.
Open-source utilities for microbial classification, NGS preprocessing, alignment, primer analysis, and multi-platform FASTQ merging—written primarily in Rust for performance and portability.
Microbial classifier
MicroBioLens
Custom-panel microbial shotgun / 16S classifier with cascade indexing and convergence early-stop. Fetch references from NCBI, build an index, then analyse paired FASTQ reads.
View on GitHubRNA-seq aligner
JapalitySplice
Sparse k-mer, splice-aware RNA-Seq aligner designed for resource-constrained environments—edge devices, laptops, and teaching labs. Commercial use requires a separate licence.
View on GitHubDNA short-read aligner
JapalityAligner
Memory-frugal DNA short-read aligner with an open-syncmer index and SAM output. CUDA, Vulkan, or CPU paths for desktops and resource-constrained hosts.
View on GitHubNGS preprocessing
JapalityECHO
Zero-configuration NGS read preprocessing with adapter trimming, quality pruning, context-aware error correction, and optional GPU acceleration.
View on GitHubPrimer analysis
japality-primer
In silico primer specificity checker—IUPAC-aware PCR simulation, multi-genome specificity matrices, and FASTQ read scanning with mismatch tolerance.
View on GitHubFASTQ merge
japality-cib
Safely merges paired-end FASTQ from the same sample sequenced on two platforms (e.g. Illumina + BGI/Huada), with manifests, dry-run, and streaming I/O.
View on GitHubResearch utilities
Watermarking and defensive lab probes.
Additional public tools that support security research, media integrity, and controlled app validation workflows.
Digital watermarking
GN-QIM
Generalized Nonlinear Quantization Index Modulation—a sublinear power-law QIM scheme for JPEG-robust digital watermarking in the DCT domain.
View on GitHubDefensive networking
safelink-lab-server
Single Go binary probe server for defensive WiFi / captive-portal / TLS validation. Deploy only on infrastructure you own—not for unauthorised networks.
View on GitHubLicences
Use the licence on each repository.
MIT and GPL-3.0 terms appear across the public portfolio. Some projects (for example JapalitySplice) require a commercial licence for proprietary or internal business use. Issues belong on GitHub; commercial licensing can go by email.
Commercial licence enquirySource of truthGitHub is authoritative for code, issues, releases, and the current licence text.
Not every appMost Japality mobile apps are store products and are not open source.
No warrantyPublic software is provided without warranty unless a separate written agreement says otherwise.
Contact
Questions about a public project?
For bugs and feature requests, prefer GitHub issues. For commercial licensing, security reports, or collaboration around open-source work, email us with a non-confidential summary.
info@japality.com
Do not send credentials, private keys, or sensitive datasets.